Flicek, Paul Person

Publications in VIVO

 

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Publications

selected publications

• article

  • GET_PANGENES: calling pangenes from plant genome alignments confirms presence-absence variation.  Genome Biology.  2023
  • Ensembl Genomes 2022: an expanding genome resource for non-vertebrates..  Nucleic Acids Research.  2022
  • The Ensembl COVID-19 resource: Ongoing integration of public SARS-CoV-2 data.  Nucleic Acids Research.  2022
  • K‐mer counting and curated libraries drive efficient annotation of repeats in plant genomes.  The Plant Genome.  2021
  • Ensembl Genomes 2020-enabling non-vertebrate genomic research..  Nucleic Acids Research.  2020
  • Gramene 2021: harnessing the power of comparative genomics and pathways for plant research.  Nucleic Acids Research.  2020

• chapter

  • Scripting Analyses of Genomes in Ensembl Plants.  Methods in Molecular Biology. 2022

• document

  • Calling pangenes from plant genome alignments confirms presence-absence variation 2023
  • Efficient masking of plant genomes by combining kmer counting and curated repeats 2021
  • The Ensembl COVID-19 resource: Ongoing integration of public SARS-CoV-2 data.  Horticulture research. 2020

Contact

full name

• Paul Flicek