selected publications
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article
- Wheat Long Noncoding RNAs from Organelle and Nuclear Genomes Carry Conserved microRNA Precursors Which May Together Comprise Intricate Networks in Insect Responses. International Journal of Molecular Sciences. 2023
- The complete genome sequence of elite bread wheat cultivar, “Sonmez”. F1000Research. 2022
- Comparative Analysis of Coding and Non-Coding Features within Insect Tolerance Loci in Wheat with Their Homologs in Cereal Genomes. International Journal of Molecular Sciences. 2021
- Multiple Variant Calling Pipelines in Wheat Whole Exome Sequencing. International Journal of Molecular Sciences. 2021
- OMICs, Epigenetics, and Genome Editing Techniques for Food and Nutritional Security. Plants. 2021
- Pan-Genome miRNomics in Brachypodium. Plants. 2021
- A large-scale multiomics analysis of wheat stem solidness and the wheat stem sawfly feeding response, and syntenic associations in barley, Brachypodium, and rice. Functional & Integrative Genomics. 2018
- Chromosome-based survey sequencing reveals the genome organization of wild wheat progenitor Triticum dicoccoides. Plant Biotechnology Journal. 2018
- Shifting the limits in wheat research and breeding using a fully annotated reference genome.. Science. 2018
- A large-scale chromosome-specific SNP discovery guideline. Functional & Integrative Genomics. 2017
- A Comprehensive Prescription for Plant miRNA Identification.. Frontiers in Plant Science. 2016
- Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia. Proceedings of the National Academy of Sciences of the United States of America. 2015
- Molecular organization and comparative analysis of chromosome 5B of the wild wheat ancestor Triticum dicoccoides. Scientific Reports. 2015
- Plant miRNAs: biogenesis, organization and origins. Functional & Integrative Genomics. 2015
- Root precursors of microRNAs in wild emmer and modern wheats show major differences in response to drought stress. Functional & Integrative Genomics. 2015
- Sequencing chromosome 5D of Aegilops tauschii and comparison with its allopolyploid descendant bread wheat (Triticum aestivum). Plant Biotechnology Journal. 2015
- Stress responsive miRNAs and isomiRs in cereals. Plant Science. 2015
- The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements. BMC Genomics. 2015
- Next-generation sequencing of flow-sorted wheat chromosome 5D reveals lineage-specific translocations and widespread gene duplications. BMC Genomics. 2014
- Genomics Approaches for Crop Improvement against Abiotic Stress. Scientific World Journal. 2013
- Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A. PLOS ONE. 2013
- Proteome changes in wild and modern wheat leaves upon drought stress by two-dimensional electrophoresis and nanoLC-ESI-MS/MS. Plant Molecular Biology. 2013
- Autophagy-related gene, TdAtg8, in wild emmer wheat plays a role in drought and osmotic stress response. Planta. 2012
- Plant abiotic stress signaling.. Plant signaling & behavior. 2012
- Subgenomic analysis of microRNAs in polyploid wheat. Functional & Integrative Genomics. 2012
- The drought response displayed by a DRE-binding protein from Triticum dicoccoides. Plant Physiology and Biochemistry. 2011
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document
- Reference Genome Sequencing Of The Elite Bread Wheat Cultivar, “Sonmez” 2022
- Zn-Deficiency Responsive Transcripts in Agrostis Species Revealed by mRNA Differential Display. Molecular Breeding of Forage and Turf. 2015