selected publications
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article
- Approaches to increase the validity of gene family identification using manual homology search tools. Genetica. 2023
- DNABERT-based explainable lncRNA identification in plant genome assemblies. Computational and structural biotechnology journal. 2023
- Legume-wide comparative analysis of pod shatter locus PDH1 reveals phaseoloid specificity, high cowpea expression and stress responsive genomic context. The Plant Journal. 2023
- The conservation of gene models can support genome annotation. Plant Genome. 2023
- crosshap. Bioinformatics. 2023
- Evaluating Plant Gene Models Using Machine Learning. Plants. 2022
- Expanding Gene-Editing Potential in Crop Improvement with Pangenomes. International Journal of Molecular Sciences. 2022
- Isolation and Sequencing of Chromosome Arm 7RS of Rye, Secale cereale. International Journal of Molecular Sciences. 2022
- Pangenomes as a Resource to Accelerate Breeding of Under-Utilised Crop Species. International Journal of Molecular Sciences. 2022
- Pangenomics and Crop Genome Adaptation in a Changing Climate. Plants. 2022
- The Global Assessment of Oilseed Brassica Crop Species Yield, Yield Stability and the Underlying Genetics. Plants. 2022
- Studying the Genetic Diversity of Yam Bean Using a New Draft Genome Assembly. Agronomy. 2021
- Induced Methylation in Plants as a Crop Improvement Tool: Progress and Perspectives. Agronomy. 2020
- Plant pangenomics. Current Opinion in Plant Biology. 2020
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chapter
- An SGSGeneloss-Based Method for Constructing a Gene Presence-Absence Table Using Mosdepth. Plant Comparative Genomics. 2022
- Application of pangenomics for wheat molecular breeding. Molecular Breeding in Wheat, Maize and Sorghum. 2021
- High-Throughput Genotyping Technologies in Plant Taxonomy. Molecular Plant Taxonomy. 2021
- Bioinformatics and plant breeding. Quantitative genetics, genomics and plant breeding. 2020
- Legume pangenome construction using an iterative mapping and assembly approach. Legume Genomics. 2020
- Method for Genome-Wide Association Study. Methods in Molecular Biology. 2020
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