selected publications
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article
- Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli 2009
- Prediction of TF target sites based on atomistic models of protein-DNA complexes 2008
- RegulonDB (version 6.0): Gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation 2008
- The Role of DNA-binding Specificity in the Evolution of Bacterial Regulatory Networks 2008
- TFmodeller: Comparative modelling of protein-DNA complexes 2007
- Comparative footprinting of DNA-binding proteins 2006