selected publications
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article
- Bioinformatics tools and databases for analysis of next-generation sequence data. Briefings in Functional Genomics. 2012
- Capturing the Biofuel Wellhead and Powerhouse: The Chloroplast and Mitochondrial Genomes of the Leguminous Feedstock Tree Pongamia pinnata. PLOS ONE. 2012
- Sequencing and assembly of low copy and genic regions of isolated Triticum aestivum chromosome arm 7DS. Plant Biotechnology Journal. 2011
- CMap3D: A 3D visualization tool for comparative genetic maps. Bioinformatics. 2010
- Future tools for association mapping in crop plants. Genome. 2010
- Targeted identification of genomic regions using TAGdb. Plant Methods. 2010
- AutoSNPdb: An annotated single nucleotide polymorphism database for crop plants. Nucleic Acids Research. 2009
- De novo sequencing of plant genomes using second-generation technologies. Briefings in Bioinformatics. 2009
- Discovering genetic polymorphisms in next-generation sequencing data. Plant Biotechnology Journal. 2009
- Genome sequencing approaches and successes. Methods in Molecular Biology. 2009
- Single nucleotide polymorphism discovery in barley using autoSNPdb. Plant Biotechnology Journal. 2009