selected publications
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article
- From Microbes to Microbiomes: Applications for Plant Health and Sustainable Agriculture. Phytopathology. 2024
- Labels that limit: A framework for reducing sales of ornamental invasive plants. Journal of Science Policy & Governance. 2024
- Capturing Wheat Phenotypes at the Genome Level.. Frontiers in Plant Science. 2022
- Enabling sustainable agriculture through understanding and enhancement of microbiomes. New Phytologist. 2021
- Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly. The Plant journal : for cell and molecular biology. 2021
- Towards a unified data infrastructure to support European and global microbiome research: a call to action. Environmental Microbiology. 2021
- Community-driven Metadata Standards for Agricultural Microbiome Research. Phytobiomes Journal. 2020
- Correction to: Microbiome definition re-visited: old concepts and new challenges.. Microbiome. 2020
- Development of Microbiome Biobanks - Challenges and Opportunities.. Trends in microbiology. 2020
- Microbiome definition re-visited: old concepts and new challenges.. Microbiome. 2020
- Mobilizing Crop Biodiversity.. Molecular Plant. 2020
- IWGSC - Towards a Functionally Annotated Wheat Genome Reference Sequence 2019
- Report on the SCRA Nuts and Bolts Workshop II: case studies of citrus greening, Ultra-low Gossypol Cotton, and blight tolerant, low-acrylamide potato. GM crops & food. 2019
- Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science. 361:7191. 2018
- The IWGSC Data Repository and Wheat Data Resources Hosted at URGI: Overview and Perspectives 2018
- International Wheat Genome Sequencing Consortium (IWGSC) 2018
- High throughput SNP discovery and genotyping in hexaploid wheat. PLOS ONE. 13. 2018
- High throughput SNP discovery and genotyping in hexaploid wheat.. PLOS ONE. 2018
- Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data.. Genome Biology. 2018
- Sequencing and assembly of the wheat genome 2017
- IWGSC Sequence Repository: Moving towards tools to facilitate data integration for the reference sequence of wheat 2016
- The U.S. Culture Collection Network lays the foundation for progress in preservation of valuable microbial resources. Phytopathology. 2016
- A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome.. Science. 2014
- Ancient hybridizations among the ancestral genomes of bread wheat. Science. 2014
- Genome interplay in the grain transcriptome of hexaploid bread wheat.. Science. 2014
- Separating the wheat from the chaff – a strategy to utilize plant genetic resources from ex situ genebanks. Scientific Reports. 2014
- Slicing the wheat genome. Science. 2014
- Human pathogens on plants: Designing a multidisciplinary strategy for research. Phytopathology. 2013
- Risk assessment and regulation of molecular farming - a comparison between Europe and US.. Current pharmaceutical design. 2013
- Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.). PLOS ONE. 2013
- Analyses of pig genomes provide insight into porcine demography and evolution. Nature. 2012
- Integrating cereal genomics to support innovation in the Triticeae. Functional & Integrative Genomics. 2012
- Subgenomic analysis of microRNAs in polyploid wheat. Functional & Integrative Genomics. 2012
- Crop genome sequencing: lessons and rationales. Trends in Plant Science. 2011
- Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science. 2009
- Solving the maze. Science. 2009
- A physical map of the 1-gigabase bread wheat chromosome 3B.. Science. 2008
- Physical mapping of the wheat genome: A coordinated effort to lay the foundation for genome sequencing and develop tools for breeders. Israel Journal of Plant Sciences. 2007
- Swine Genome Sequencing Consortium (SGSC): A strategic roadmap for sequencing the pig genome. Comparative and Functional Genomics. 2005
- A plant-associated microbe genome initiative. Phytopathology. 2003
- The power of genomics: Increasing value from the lab, to the field, and beyond. Mycopathologia. 2002
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book
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chapter
- Sequencing and assembly of the wheat genome. Achieving sustainable cultivation of wheat. 2017
- Progress towards achieving a reference genome sequence to accelerate the selection of improved wheat varieties. World Wheat Book, Vol 3: A History of Wheat Breeding. 2016
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abstract
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document
- Optical maps refine the bread wheat Triticum aestivum cv Chinese Spring genome assembly. Dryad. 2021
- Extracting numerical information about corn composition from texts. WMSCI 2015 - 19th World Multi-Conference on Systemics, Cybernetics and Informatics, Proceedings. 2015
- Wheat and Barley Genome Sequencing. Genetics and Genomics of the Triticeae. 2009