selected publications
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article
- Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids. The Plant Journal. 2022
- Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature Communications. 2020
- Global diversity of the Brachypodium species complex as a resource for genome-wide association studies demonstrated for agronomic traits in response to climate. Genetics. 2019
- Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes. New Phytologist. 2018
- Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species 2017
- Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure. Nature Communications. 2017
- Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat. Scientific Reports. 2017
- Brachypodium as an emerging model for cereal-pathogen interactions. Annals of Botany. 2015
- Genome diversity in Brachypodium distachyon: Deep sequencing of highly diverse inbred lines. Plant Journal. 2014
- Brachypodium as a Model for the Grasses: Today and the Future. Plant Physiology. 2011
- Genome sequencing and analysis of the model grass Brachypodium distachyon.. Nature. 463:763-768. 2010
- Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon. BMC Plant Biology. 2009
- Molecular, morphological, and cytological analysis of diverse Brachypodium distachyon inbred lines. Genome. 2009
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