selected publications
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article
- AlloSHP: deconvoluting single homeologous polymorphism for phylogenetic analysis of allopolyploids. Plant Methods. 2025
- Pangenome Analysis of Plant Transcripts and Coding Sequences.. Methods in molecular biology (Clifton, N.J.). 2022
- Patterns of pan‐genome occupancy and gene coexpression under water‐deficit in Brachypodium distachyon. Molecular Ecology. 2022
- Tracking the ancestry of known and ‘ghost’ homeologous subgenomes in model grass Brachypodium polyploids. The Plant journal : for cell and molecular biology. 2022
- Comparative genomics, evolution, and drought-induced expression of dehydrin genes in model brachypodium grasses. Plants (Basel, Switzerland). 2021
- Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors.. Nature Communications. 2020
- Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes. New Phytologist. 2018
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document
- Deconvolution of Single Homeologous Polymorphism (SHP) drives phylogenetic analysis of allopolyploids 2025
- Evolution and functional dynamics of dehydrins in model Brachypodium grasses. Horticulture research. 2021
- Patterns of gene co-expression under water-deficit treatments and pan-genome occupancy in Brachypodium distachyon. Horticulture research. 2021
- Tracking the Ancestry of Known and ‘Ghost’ Homeologous Subgenomes in Model Grass Brachypodium Polyploids. Horticulture research. 2021