selected publications
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article
- De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome. Nature Communications. 2025
- Genetic architecture of rust resistance in a wheat (Triticum turgidum) diversity panel. Frontiers in Plant Science. 2023
- A Combination of Leaf Rust Resistance Genes, Including Lr34 and Lr46, Is the Key to the Durable Resistance of the Canadian Wheat Cultivar, Carberry. Frontiers in Plant Science. 2022
- Genome-based prediction of agronomic traits in spring wheat under conventional and organic management systems. Theoretical and Applied Genetics. 2022
- Genome-wide association mapping of agronomic traits and grain characteristics in spring wheat under conventional and organic management systems. Journal of Plant Registrations. 2022
- Genomic Predictions for Common Bunt, FHB, Stripe Rust, Leaf Rust, and Leaf Spotting Resistance in Spring Wheat. Genes. 2022
- Main effect and epistatic QTL affecting spike shattering and association with plant height revealed in two spring wheat (Triticum aestivum L.) populations. Theoretical and Applied Genetics. 2022
- A Combination of Leaf Rust Resistance Genes, Including Lr34 and Lr46, Is the Key to the Durable Resistance of the Canadian Wheat Cultivar, Carberry.. Frontiers in Plant Science. 2021
- Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry. The American Journal of Human Genetics. 2021
- Genetic diversity and selective sweeps in historical and modern Canadian spring wheat cultivars using the 90K SNP array. Scientific Reports. 2021
- Genomic prediction of agronomic traits in wheat using different models and cross-validation designs. Theoretical and Applied Genetics. 2021
- Mapping stem rust resistance loci effective in Kenya in Canadian spring wheat (Triticum aestivum L.) lines ‘AAC Prevail’ and ‘BW961’. Canadian Journal of Plant Pathology. 2021
- Mapping stem rust resistance loci effective in Kenya in Canadian spring wheat (Triticum aestivum L.) lines ‘AAC Prevail’and ‘BW961’. Canadian Journal of Plant Pathology. 2021
- Physical mapping of QTL associated with agronomic and end-use quality traits in spring wheat under conventional and organic management systems. Theoretical and Applied Genetics. 2021
- Physical mapping of QTL in four spring wheat populations under conventional and organic management systems. I. Earliness. Plants (Basel, Switzerland). 2021
- Genomic prediction of agronomic traits in wheat using different models and cross-validation designs.. Theoretical and Applied Genetics. 134:381-398. 2021
- Multiple wheat genomes reveal global variation in modern breeding.. Nature. 588:277-283. 2020
- Copy number variation of TdDof controls solid-stemmed architecture in wheat.. Proceedings of the National Academy of Sciences of the United States of America. 117:28708-28718. 2020
- Potential of Genomic Selection and Integrating “Omics” Data for Disease Evaluation in Wheat. Crop Breeding, Genetics and Genomics. 4. 2020
- Machine learning analyses of methylation profiles uncovers tissue-specific gene expression patterns in wheat.. The Plant Genome. 13. 2020
- Genetic analyses of native Fusarium head blight resistance in two spring wheat populations identifies QTL near the B1, Ppd-D1, Rht-1, Vrn-1, Fhb1, Fhb2, and Fhb5 loci.. Theoretical and Applied Genetics. 133:1-22. 2020
- Mapping quantitative trait loci associated with leaf rust resistance in five spring wheat populations using single nucleotide polymorphism markers.. PLOS ONE. 15. 2020
- Comparisons of sampling methods for assessing intra-and inter-accession genetic diversity in three rice species using genotyping by sequencing. Scientific Reports. 2020
- Copy number variation of TdDof controls solid-stemmed architecture in wheat. Proceedings of the National Academy of Sciences of the United States of America. 2020
- Evaluation of variant calling tools for large plant genome re-sequencing. BMC Bioinformatics. 2020
- Genetic analyses of native Fusarium head blight resistance in two spring wheat populations identifies QTL near the B1, Ppd-D1, Rht-1, Vrn-1, Fhb1, Fhb2, and Fhb5 loci. Theoretical and Applied Genetics. 2020
- Machine learning analyses of methylation profiles uncovers tissue-specific gene expression patterns in wheat. The Plant Genome. 2020
- Mapping quantitative trait loci associated with leaf rust resistance in five spring wheat populations using single nucleotide polymorphism markers. PLOS ONE. 2020
- Mapping of Genetic Loci Conferring Resistance to Leaf Rust From Three Globally Resistant Durum Wheat Sources.. Frontiers in Plant Science. 10:1247. 2019
- Mapping quantitative trait loci associated with common bunt resistance in a spring wheat ( Triticum aestivum L.) variety Lillian. Theoretical and Applied Genetics. 132:3023-3033. 2019
- Fusarium Head Blight in Durum Wheat: Recent Status, Breeding Directions, and Future Research Prospects.. Phytopathology. 109:1664-1675. 2019
- Fusarium head blight in durum wheat: Recent status, breeding directions, and future research prospects. Phytopathology. 2019
- Mapping of genetic loci conferring resistance to leaf rust from three globally resistant durum wheat sources. Frontiers in Plant Science. 2019
- Mapping quantitative trait loci associated with common bunt resistance in a spring wheat (Triticum aestivum L.) variety Lillian. Theoretical and Applied Genetics. 2019
- Haplotype Loci Under Selection in Canadian Durum Wheat Germplasm Over 60 Years of Breeding: Association With Grain Yield, Quality Traits, Protein Loss, and Plant Height.. Frontiers in Plant Science. 9:1589-1589. 2018
- High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat.. PLOS ONE. 13. 2018
- Genetic analysis of resistance to stripe rust in durum wheat (Triticum turgidum L. var. durum).. PLOS ONE. 13. 2018
- Genomic selection for grain yield and quality traits in durum wheat. Molecular Breeding. 38:75. 2018
- Characterization and mapping of leaf rust resistance in four durum wheat cultivars.. PLOS ONE. 13. 2018
- Characterization and mapping of leaf rust resistance in four durum wheat cultivars. PLOS ONE. 2018
- Genetic analysis of resistance to stripe rust in durum wheat (Triticum turgidum L. var. durum). PLOS ONE. 2018
- Haplotype loci under selection in canadian durum wheat germplasm over 60 years of breeding: Association with grain yield, quality traits, protein loss, and plant height. Frontiers in Plant Science. 2018
- High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat. PLOS ONE. 2018
- Mapping of QTLs associated with resistance to common bunt, tan spot, leaf rust, and stripe rust in a spring wheat population. Molecular Breeding. 37:144-144. 2017
- Genome-wide association mapping of genomic regions associated with phenotypic traits in Canadian western spring wheat. Molecular Breeding. 37:1-17. 2017
- Quantitative trait loci for resistance to stripe rust of wheat revealed using global field nurseries and opportunities for stacking resistance genes.. Theoretical and Applied Genetics. 130:2617-2635. 2017
- Population Structure and Genomewide Association Analysis of Resistance to Disease and Insensitivity to Ptr Toxins in Canadian Spring Wheat Using 90K SNP Array. Journal of Plant Registrations. 57:1522-1539. 2017
- High density mapping and haplotype analysis of the major stem-solidness locus SSt1 in durum and common wheat.. PLOS ONE. 12. 2017
- Allelic variation and effects of 16 candidate genes on disease resistance in western Canadian spring wheat cultivars. Molecular Breeding. 37:23. 2017
- QTLs associated with agronomic traits in the Attila × CDC Go spring wheat population evaluated under conventional management.. PLOS ONE. 12. 2017
- Single Marker and Haplotype-Based Association Analysis of Semolina and Pasta Colour in Elite Durum Wheat Breeding Lines Using a High-Density Consensus Map.. PLOS ONE. 12. 2017
- Correction: Single marker and haplotype-based association analysis of semolina and pasta colour in elite durum wheat breeding lines using a high-density consensus map (PLoS ONE (2017) 12:1 (e0170941) DOI: 10.1371/journal.pone.0170941). PLOS ONE. 2017
- Effect of co-segregating markers on high-density genetic maps and prediction of map expansion using machine learning algorithms. Frontiers in Plant Science. 2017
- High density mapping and haplotype analysis of the major stem-solidness locus SSt1 in durum and common wheat. PLOS ONE. 2017
- QTLs associated with agronomic traits in the Attila × CDC Go spring wheat population evaluated under conventional management. PLOS ONE. 2017
- Quantitative trait loci for resistance to stripe rust of wheat revealed using global field nurseries and opportunities for stacking resistance genes. Theoretical and Applied Genetics. 2017
- Single marker and haplotype-based association analysis of semolina and pasta colour in elite durum wheat breeding lines using a high-density consensus map. PLOS ONE. 2017
- Mapping QTLs Controlling Agronomic Traits in the ‘Attila’ × ‘CDC Go’ Spring Wheat Population under Organic Management using 90K SNP Array. Journal of Plant Registrations. 57:365-377. 2017
- QTLs Associated with Agronomic Traits in the Cutler × AC Barrie Spring Wheat Mapping Population Using Single Nucleotide Polymorphic Markers.. PLOS ONE. 11. 2016
- Quantitative Trait Loci Associated with Phenological Development, Low-Temperature Tolerance, Grain Quality, and Agronomic Characters in Wheat (Triticum aestivum L.).. PLOS ONE. 11. 2016
- QTLs associated with agronomic traits in the cutler × AC barrie spring wheat mapping population using single nucleotide polymorphic markers. PLOS ONE. 2016
- Quantitative trait loci associated with phenological development, low-temperature tolerance, grain quality, and agronomic characters in wheat (Triticum aestivum L.). PLOS ONE. 2016
- A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding. Plant Biotechnology Journal. 2015
- A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry. Nature Genetics. 2013
- Pooled DNA Resequencing of 68 myocardial infarction candidate genes in French Canadians 2012
- Identification, replication, and fine-mapping of loci associated with adult height in individuals of African ancestry. PLOS Genetics. 2011
- Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions. BMC Plant Biology. 2010
- Construction of an integrated consensus map of the apple genome based on four mapping populations. Tree Genetics and Genomes. 2008
- Genome-wide association mapping of agronomic traits and grain characteristics in spring wheat under conventional and organic management systems. Journal of Plant Registrations.
- Text S1 Identification, replication and fine-mapping of loci associated with adult height in individuals of African ancestry
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abstract
- Genome wide association study for grain-yield and protein content in wheat grown under different environments 2024
- Machine learning feature selection improves single and multi-trait genomic prediction of wheat quality traits 2024
- CHALLENGES OF TRAIT COMPLEXES IN SPRING WHEAT BREEDING 2019
- CHARACTERIZING AND COMBINING FHB RESISTANCE IN DURUM WHEAT GERMPLASM FROM EUROPEAN AND NORTH AMERICAN BREEDING PROGRAMS 2019
- HIGH-THROUGHPUT SNP MARKERS FOR AWN AND GLUME COLOUR IN DURUM WHEAT 2019
- MACHINE LEARNING AND ARTIFICIAL INTELLIGENCE ALGORITHMS FOR PREDICTING GENES EXPRESSION IN WHEAT USING METHYLATION PATTERNS 2019
- QUANTITATIVE TRAIT LOCI ASSOCIATED WITH RESISTANCE TO FUSARIUM HEAD BLIGHT IN A CDC HUGHES X AAC CONCORD DERIVED WHEAT POPULATION 2019
- THE CHALLENGE OF ASSEMBLING COMPLEX TRAITS FROM ELITE VARIETIES: A LOOK AT PRACTICAL VARIETY DEVELOPMENT IN A SPRING WHEAT DH POPULATION CDC HUGHES/AAC CONCORD 2019
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document
- A stable quantitative trait locus conditioning leaf rust (Puccinia triticina) resistance on chromosome 2D of the wheat cultivar'Stettler'.. Canadian Journal of Plant Pathology. 2019
- A Stem Rust Resistance QTL Located on Chromosome 5D in Two Contemporary Canadian Spring Wheat Varieties. Plant and Animal Genome XXVIII Conference (January 11-15, 2020).
- Mapping QTL for Fusarium Head Blight Resistance in Canadian Spring Wheat AC Barrie. Plant and Animal Genome XXVI Conference (January 13-17, 2018).
- Molecular Breeding Opportunities and Challenges for Complex Trait Recombination on Wheat Chromosome 4B. Plant and Animal Genome XXVII Conference (January 12-16, 2019).